INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD2 ACC RF01299 DESC Small nucleolar RNA SNORD2 STATES 214 NODES 66 CLEN 70 W 123 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 19:12:03 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 17 EFFN 3.681396 CKSUM 1590481330 NULL 0.000 0.000 0.000 0.000 GA 37.00 TC 37.30 NC 36.80 EFP7GF -10.8572 0.71879 ECMLC 0.66414 -4.78781 3.49561 1600000 294016 0.004081 ECMGC 0.37976 -17.71012 -3.25763 1600000 96757 0.004134 ECMLI 0.64193 -3.24459 5.03700 1600000 244327 0.004911 ECMGI 0.40143 -12.55858 0.21891 1600000 67558 0.005921 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 123 192 -9.358 -9.298 -0.018 -8.074 -8.354 -8.749 IL 1 1 2 1 6 1 25 124 193 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 26 124 193 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 92 g c - - MP 3 2 3 7 6 2 30 123 192 -9.358 -9.298 -0.018 -8.074 -8.354 -8.749 -2.267 -1.924 -2.445 1.798 -2.560 -1.111 0.979 -2.792 -2.487 1.959 -2.944 0.814 0.780 -2.496 -0.616 -0.691 ML 4 2 3 7 6 1 23 121 190 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 23 121 190 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 18 117 185 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 25 122 191 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 25 122 191 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 91 a u - - MP 9 8 6 13 6 2 28 121 190 -9.358 -9.298 -0.018 -8.074 -8.354 -8.749 -3.513 -2.829 -3.600 2.947 -3.689 -4.672 0.531 -3.741 -3.559 1.180 -4.092 0.037 1.192 -3.889 -1.399 -2.511 ML 10 8 6 13 6 1 22 119 188 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 22 119 188 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 17 115 184 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 24 120 189 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 24 120 189 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 90 G C - - MP 15 14 6 19 6 2 27 119 188 -9.358 -9.298 -0.018 -8.074 -8.354 -8.749 -3.663 -1.696 -3.606 1.159 -4.299 -1.683 0.138 -4.174 -3.845 3.182 -4.177 0.149 -0.114 -3.481 -1.764 -2.634 ML 16 14 6 19 6 1 22 117 186 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 21 117 186 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 17 113 182 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 23 118 187 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 24 118 187 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 89 U A - - MP 21 20 6 25 6 2 25 117 186 -9.358 -9.298 -0.018 -8.074 -8.354 -8.749 -4.354 -4.339 -4.147 -0.534 -2.933 -4.642 1.853 -3.696 -4.160 -0.355 -4.508 -2.323 3.167 -4.453 0.083 -3.004 ML 22 20 6 25 6 1 21 115 184 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 20 115 184 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 16 112 181 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 22 116 185 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 23 116 185 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 88 G C - - MP 27 26 6 31 6 2 23 115 184 -9.358 -9.298 -0.018 -8.074 -8.354 -8.749 -5.793 -3.611 -6.078 -0.545 -6.686 -5.082 -1.791 -6.334 -4.950 3.814 -5.226 -1.370 -2.155 -5.137 -3.900 -4.940 ML 28 26 6 31 6 1 20 114 182 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 19 113 182 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 16 111 180 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 21 114 183 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 21 114 183 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 87 A U - - MP 33 32 6 37 4 2 21 113 182 -7.531 -7.738 -0.035 -6.152 -4.848 -3.661 -4.727 3.739 -5.681 -6.891 -1.310 -4.697 -4.651 -0.075 -5.246 -1.005 -1.715 -5.854 -3.244 -3.551 ML 34 32 6 37 4 1 19 112 181 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 17 111 180 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 16 110 179 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 20 113 182 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 20 113 182 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - a - - - ML 39 38 6 41 3 1 20 111 180 -8.512 -0.014 -7.166 0.505 -0.524 -0.531 0.255 D 40 38 6 41 3 0 15 109 178 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 19 112 181 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 42 41 3 44 3 1 19 110 179 -8.512 -0.014 -7.166 1.310 -2.027 -0.110 -1.524 D 43 41 3 44 3 0 14 108 177 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 18 111 180 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 45 44 3 47 3 1 18 109 178 -8.512 -0.014 -7.166 -1.836 -1.254 -2.584 1.648 D 46 44 3 47 3 0 14 107 176 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 17 110 179 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 48 47 3 50 3 1 17 108 177 -8.512 -0.014 -7.166 -0.850 -2.203 1.497 -1.305 D 49 47 3 50 3 0 13 106 175 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 17 109 178 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 51 50 3 53 3 1 16 107 176 -8.512 -0.014 -7.166 1.671 -2.241 -2.170 -1.389 D 52 50 3 53 3 0 12 105 174 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 16 108 177 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 54 53 3 56 3 1 15 106 175 -8.512 -0.014 -7.166 -0.840 -1.338 -1.343 1.407 D 55 53 3 56 3 0 12 104 173 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 15 107 176 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - G - - - ML 57 56 3 59 3 1 14 105 174 -8.512 -0.014 -7.166 -2.680 -4.037 1.883 -3.408 D 58 56 3 59 3 0 11 103 172 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 14 106 175 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - G - - - ML 60 59 3 62 3 1 13 104 173 -8.512 -0.014 -7.166 -0.588 -1.766 1.432 -1.545 D 61 59 3 62 3 0 10 102 171 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 13 105 174 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - C - - - ML 63 62 3 65 3 1 12 103 172 -8.512 -0.525 -1.726 -1.810 1.492 -2.695 -0.420 D 64 62 3 65 3 0 10 102 171 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 14 104 173 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 66 65 3 68 3 1 13 103 171 -8.007 -0.020 -6.661 1.737 -2.459 -2.082 -2.009 D 67 65 3 68 3 0 9 101 170 -8.494 -0.477 -1.842 IL 68 68 3 68 3 1 12 103 172 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - u - - - ML 69 68 3 71 3 1 12 102 170 -8.434 -0.015 -7.088 0.142 -0.508 -1.293 0.836 D 70 68 3 71 3 0 7 100 169 -6.954 -0.740 -1.346 IL 71 71 3 71 3 1 11 102 171 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 72 71 3 74 3 1 12 101 169 -8.512 -0.014 -7.166 1.749 -2.731 -1.766 -2.369 D 73 71 3 74 3 0 5 98 167 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 10 101 170 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - c - - - ML 75 74 3 77 3 1 11 100 168 -8.512 -0.014 -7.166 -1.227 0.829 -2.077 0.642 D 76 74 3 77 3 0 4 97 166 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 9 100 169 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - C - - - ML 78 77 3 80 3 1 10 99 167 -8.512 -0.014 -7.166 -2.499 1.741 -3.338 -1.394 D 79 77 3 80 3 0 4 96 165 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 9 99 168 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - A - - - ML 81 80 3 83 3 1 10 98 166 -8.512 -0.014 -7.166 1.710 -2.599 -1.522 -2.223 D 82 80 3 83 3 0 3 95 164 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 8 98 167 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - U - - - ML 84 83 3 86 3 1 9 97 165 -8.512 -0.014 -7.166 -2.528 -2.351 -3.298 1.819 D 85 83 3 86 3 0 2 94 163 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 7 97 166 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - C - - - ML 87 86 3 89 3 1 8 96 164 -8.512 -0.014 -7.166 -3.055 1.847 -3.857 -2.228 D 88 86 3 89 3 0 2 93 162 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 7 96 165 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - U - - - ML 90 89 3 92 3 1 8 95 163 -8.512 -0.014 -7.166 -2.528 -2.351 -3.298 1.819 D 91 89 3 92 3 0 1 92 161 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 6 95 164 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - U - - - ML 93 92 3 95 3 1 7 94 162 -8.512 -0.014 -7.166 -2.528 -2.351 -3.298 1.819 D 94 92 3 95 3 0 0 91 160 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 5 94 163 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - U - - - ML 96 95 3 98 3 1 6 93 162 -8.512 -0.014 -7.166 -2.528 -2.351 -3.298 1.819 D 97 95 3 98 3 0 0 90 159 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 4 93 162 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - C - - - ML 99 98 3 101 3 1 6 92 161 -8.512 -0.014 -7.166 -1.580 1.500 -1.855 -0.833 D 100 98 3 101 3 0 0 89 158 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 4 92 161 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - G - - - ML 102 101 3 104 3 1 5 91 160 -8.512 -0.014 -7.166 -0.192 -2.364 1.404 -1.818 D 103 101 3 104 3 0 0 88 157 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 3 91 160 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - G - - - ML 105 104 3 107 3 1 5 90 159 -8.512 -0.014 -7.166 -1.287 -3.083 1.722 -2.531 D 106 104 3 107 3 0 0 87 156 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 2 90 159 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - G - - - ML 108 107 3 110 3 1 4 89 158 -8.512 -0.014 -7.166 -0.904 -2.186 1.496 -1.235 D 109 107 3 110 3 0 0 86 155 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 2 89 158 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - A - - - ML 111 110 3 113 3 1 4 88 157 -8.512 -0.014 -7.166 1.741 -2.699 -1.710 -2.335 D 112 110 3 113 3 0 0 85 154 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 88 157 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - C - - - ML 114 113 3 116 3 1 3 87 156 -8.512 -0.014 -7.166 -2.449 1.729 -3.292 -1.322 D 115 113 3 116 3 0 0 84 153 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 87 156 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - U - - - ML 117 116 3 119 3 1 3 86 155 -8.512 -0.014 -7.166 -2.528 -2.351 -3.298 1.819 D 118 116 3 119 3 0 0 83 152 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 86 155 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - G - - - ML 120 119 3 122 3 1 2 85 154 -8.512 -0.014 -7.166 -2.680 -4.037 1.883 -3.408 D 121 119 3 122 3 0 0 82 151 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 85 154 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - A - - - ML 123 122 3 125 3 1 2 84 153 -3.483 -0.146 -7.166 1.876 -3.468 -2.998 -3.123 D 124 122 3 125 3 0 0 81 150 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 84 153 -1.262 -0.869 -4.810 0.000 0.000 0.000 0.000 [ MATL 36 ] 38 - C - - - ML 126 125 3 128 3 1 2 82 151 -8.512 -0.014 -7.166 -1.546 1.480 -1.916 -0.729 D 127 125 3 128 3 0 0 80 149 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 83 152 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 39 - c - - - ML 129 128 3 131 3 1 1 82 150 -8.512 -0.014 -7.166 -1.282 0.984 -2.146 0.470 D 130 128 3 131 3 0 0 79 148 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 82 151 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 40 - U - - - ML 132 131 3 134 3 1 1 81 149 -8.512 -0.014 -7.166 -2.528 -2.351 -3.298 1.819 D 133 131 3 134 3 0 0 78 147 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 81 150 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 41 - G - - - ML 135 134 3 137 3 1 1 80 148 -8.512 -0.014 -7.166 -1.588 -2.560 1.631 -1.322 D 136 134 3 137 3 0 0 77 146 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 80 149 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - A - - - ML 138 137 3 140 3 1 1 79 147 -8.512 -0.014 -7.166 1.022 -0.895 -1.336 0.051 D 139 137 3 140 3 0 0 76 145 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 79 148 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - a - - - ML 141 140 3 143 3 1 1 78 146 -8.512 -0.014 -7.166 0.912 -1.219 -0.345 -0.150 D 142 140 3 143 3 0 0 75 144 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 78 147 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - A - - - ML 144 143 3 146 3 1 1 77 145 -8.512 -0.014 -7.166 1.415 -1.091 -1.232 -1.193 D 145 143 3 146 3 0 0 74 143 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 77 146 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 45 - U - - - ML 147 146 3 149 3 1 1 76 144 -8.512 -0.014 -7.166 -0.859 -1.521 -2.121 1.521 D 148 146 3 149 3 0 0 73 142 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 76 145 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 46 - G - - - ML 150 149 3 152 3 1 1 75 143 -8.512 -0.048 -5.056 -1.287 -3.083 1.722 -2.531 D 151 149 3 152 3 0 0 72 141 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 75 144 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 47 - a - - - ML 153 152 3 155 3 1 1 74 142 -8.479 -0.014 -7.133 0.422 -1.191 0.366 -0.100 D 154 152 3 155 3 0 0 71 140 -6.566 -1.075 -0.958 IL 155 155 3 155 3 1 1 74 143 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 48 - A - - - ML 156 155 3 158 3 1 1 73 141 -8.512 -0.014 -7.166 1.379 -1.668 -0.879 -0.886 D 157 155 3 158 3 0 0 70 139 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 73 142 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 49 - G - - - ML 159 158 3 161 3 1 1 72 140 -8.512 -0.014 -7.166 -1.224 -1.866 1.522 -1.229 D 160 158 3 161 3 0 0 68 137 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 72 141 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 50 - A - - - ML 162 161 3 164 3 1 1 71 140 -8.512 -0.043 -5.221 1.690 -2.306 -2.218 -1.484 D 163 161 3 164 3 0 0 66 135 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 71 140 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 51 - g - - - ML 165 164 3 167 3 1 1 70 139 -2.892 -0.221 -7.137 -0.448 -1.320 0.816 0.146 D 166 164 3 167 3 0 0 59 128 -6.517 -2.030 -0.426 IL 167 167 3 167 3 1 1 76 145 -0.386 -2.170 -6.332 0.000 0.000 0.000 0.000 [ MATL 50 ] 63 - A - - - ML 168 167 3 170 3 1 1 39 70 -3.739 -0.123 -7.137 1.303 -1.053 -1.529 -0.505 D 169 167 3 170 3 0 0 35 66 -6.517 -1.132 -0.909 IL 170 170 3 170 3 1 1 43 74 -0.849 -1.265 -5.112 0.000 0.000 0.000 0.000 [ MATL 51 ] 68 - a - - - ML 171 170 3 173 3 1 1 31 52 -8.512 -0.014 -7.166 0.615 -0.881 -0.214 0.088 D 172 170 3 173 3 0 0 30 51 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 33 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 69 - U - - - ML 174 173 3 176 3 1 1 30 51 -4.164 -0.094 -7.166 -0.803 -1.078 -1.940 1.429 D 175 173 3 176 3 0 0 28 49 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 31 52 -1.681 -0.644 -4.381 0.000 0.000 0.000 0.000 [ MATL 53 ] 71 - A - - - ML 177 176 3 179 3 1 1 29 50 -8.512 -0.014 -7.166 1.138 -1.306 -0.960 -0.183 D 178 176 3 179 3 0 0 27 48 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 31 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 72 - c - - - ML 180 179 3 182 3 1 1 28 49 -8.512 -0.014 -7.166 -0.066 0.543 -1.096 0.164 D 181 179 3 182 3 0 0 26 47 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 30 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 73 - u - - - ML 183 182 3 185 3 1 1 27 48 -8.512 -0.014 -7.166 0.158 -0.205 -0.969 0.590 D 184 182 3 185 3 0 0 25 46 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 29 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 74 - c - - - ML 186 185 3 188 3 1 1 26 47 -3.780 -0.151 -5.231 -0.315 0.499 -0.550 0.138 D 187 185 3 188 3 0 0 23 44 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 28 49 -1.284 -0.860 -4.703 0.000 0.000 0.000 0.000 [ MATL 57 ] 77 - a - - - ML 189 188 3 191 3 1 1 23 44 -8.484 -0.014 -7.138 0.594 -0.728 -1.232 0.547 D 190 188 3 191 3 0 0 22 42 -6.514 -1.135 -0.906 IL 191 191 3 191 3 1 1 25 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 78 - U - - - ML 192 191 3 194 3 1 1 22 42 -8.512 -0.014 -7.166 -0.881 -0.407 -1.843 1.277 D 193 191 3 194 3 0 0 21 41 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 24 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 79 - U - - - ML 195 194 3 197 3 1 1 21 41 -8.512 -0.014 -7.166 -0.715 -0.982 -1.870 1.385 D 196 194 3 197 3 0 0 20 40 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 23 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 80 - g - - - ML 198 197 3 200 3 1 1 20 40 -4.164 -0.094 -7.166 0.157 -1.579 0.951 -0.696 D 199 197 3 200 3 0 0 18 38 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 22 43 -1.311 -0.849 -4.586 0.000 0.000 0.000 0.000 [ MATL 61 ] 83 - C - - - ML 201 200 3 203 3 1 1 16 34 -8.512 -0.014 -7.166 -3.055 1.847 -3.857 -2.228 D 202 200 3 203 3 0 0 16 34 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 84 - U - - - ML 204 203 3 206 3 1 1 14 33 -8.512 -0.014 -7.166 -2.528 -2.351 -3.298 1.819 D 205 203 3 206 3 0 0 15 33 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 85 - G - - - ML 207 206 3 209 3 1 1 13 31 -8.512 -0.014 -7.166 -1.287 -3.083 1.722 -2.531 D 208 206 3 209 3 0 0 13 32 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 86 - A - - - ML 210 209 3 212 2 1 1 1 1 * 0.000 1.684 -2.523 -1.375 -2.137 D 211 209 3 212 2 0 0 0 0 * 0.000 IL 212 212 3 212 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 65 ] - - - - - - E 213 212 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD2 ACC RF01299 DESC Small nucleolar RNA SNORD2 LENG 70 MAXL 183 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 19:12:03 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 17 EFFN 4.270752 CKSUM 1590481330 STATS LOCAL MSV -8.0884 0.71879 STATS LOCAL VITERBI -8.9549 0.71879 STATS LOCAL FORWARD -3.4951 0.71879 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.29654 1.61245 1.44646 1.23195 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 0.00000 * 1 1.33095 1.79214 0.97228 1.65575 1 g - - < 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 2 0.61844 2.43197 1.62446 1.73539 2 A - - < 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 3 1.78667 2.39257 0.42287 2.45430 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 4 3.04716 1.46916 2.83053 0.41037 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 5 3.08126 3.96397 0.08877 3.90945 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 6 0.13969 3.72919 2.53416 3.61078 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 7 1.02705 1.76065 1.76116 1.21012 7 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 8 0.45177 2.92042 1.45142 2.58558 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 9 2.79706 2.31694 3.31589 0.21799 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 10 2.03302 3.01019 0.32188 2.35392 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 11 0.20425 3.05479 3.01714 2.42285 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 12 2.03652 2.40504 2.36647 0.37769 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 13 3.42099 4.37925 0.06699 3.93303 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 14 1.84200 2.66459 0.36433 2.56124 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 15 2.78224 0.32041 3.40511 1.72011 15 C - - _ 1.38629 1.38629 1.38629 1.38629 0.41893 4.32960 1.11146 1.46634 0.26236 1.09861 0.40547 16 0.15253 3.25376 2.97641 2.95910 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03927 3.94994 3.94994 1.46634 0.26236 0.26633 1.45324 17 1.28765 1.75455 2.33045 0.79000 17 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02833 4.27116 4.27116 1.46634 0.26236 0.31972 1.29590 18 0.15377 3.41978 2.67786 3.19169 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 19 2.34356 0.77919 2.94497 0.93488 19 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 20 3.30053 0.15441 3.87425 2.45992 20 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 21 0.17964 3.32363 2.49288 3.08492 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 22 3.32449 3.17400 3.86215 0.10408 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 23 3.72018 0.08628 4.25629 3.11762 23 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 24 3.32449 3.17400 3.86215 0.10408 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 25 3.32449 3.17400 3.86215 0.10408 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 26 3.32449 3.17400 3.86215 0.10408 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 27 2.62259 0.30855 2.74395 2.05136 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 28 1.53959 3.14673 0.38508 2.77833 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 29 2.34960 3.66641 0.17228 3.28917 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 30 2.07507 2.99899 0.32243 2.30032 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 31 0.15943 3.39684 2.63474 3.16648 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 32 3.26332 0.16255 3.84145 2.40455 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 33 3.32449 3.17400 3.86215 0.10408 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 34 3.42099 4.37925 0.06699 3.93303 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 35 0.07067 3.98077 3.64083 3.75818 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.12679 2.24515 4.32960 0.78081 0.61255 1.09861 0.40547 36 2.59140 0.32324 2.79110 1.96659 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 37 2.38431 0.66996 2.99664 1.06084 39 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 38 3.32449 3.17400 3.86215 0.10408 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 39 2.61601 3.29922 0.22898 2.35758 41 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 40 0.65220 2.04175 2.37560 1.36125 42 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 41 0.73429 2.28559 1.62807 1.50450 43 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 42 0.37651 2.16891 2.29585 2.31494 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 43 2.03952 2.54735 2.97967 0.30001 45 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 44 2.34960 3.66641 0.17228 3.28917 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05241 4.32960 3.27326 1.46634 0.26236 1.09861 0.40547 45 1.08993 2.26337 1.11018 1.46855 47 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02738 4.30457 4.30457 1.46634 0.26236 0.52795 0.89114 46 0.40405 2.62484 2.02377 2.05744 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 47 2.32893 2.74386 0.30347 2.30231 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 48 0.19200 3.10260 3.05309 2.49441 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04874 4.32960 3.36974 1.46634 0.26236 1.09861 0.40547 49 1.74431 2.37075 0.78420 1.28975 51 g - - _ 1.38629 1.38629 1.38629 1.38629 0.18420 1.86582 4.30814 2.06857 0.13509 1.52851 0.24444 50 0.45358 2.15434 2.53146 1.77708 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.10998 2.40034 4.30814 1.39415 0.28508 0.56866 0.83536 51 0.94894 2.02559 1.53174 1.32889 68 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 52 1.99997 2.19632 2.83612 0.36414 69 U - - _ 1.38629 1.38629 1.38629 1.38629 0.08676 2.66027 4.32960 0.34178 1.23962 1.09861 0.40547 53 0.57206 2.35554 2.08721 1.52896 71 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 54 1.44655 0.98118 2.18054 1.28457 72 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 55 1.27602 1.52729 2.08072 0.97051 73 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 56 1.63659 1.01152 1.77030 1.30413 74 c - - _ 1.38629 1.38629 1.38629 1.38629 0.13049 2.42902 3.37518 0.79867 0.59770 1.09861 0.40547 57 0.95917 1.91873 2.28791 0.99827 77 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02728 4.30833 4.30833 1.46634 0.26236 0.57102 0.83229 58 2.06530 1.68105 2.75910 0.47210 78 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 59 1.93323 2.12141 2.78172 0.39523 79 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 60 1.28831 2.55870 0.69305 1.91862 80 G - - _ 1.38629 1.38629 1.38629 1.38629 0.08676 2.66027 4.32960 0.82646 0.57553 1.09861 0.40547 61 3.72018 0.08628 4.25629 3.11762 83 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 62 3.32449 3.17400 3.86215 0.10408 84 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 63 2.34960 3.66641 0.17228 3.28917 85 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 64 0.19731 3.26900 2.38213 3.02285 86 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 65 3.82458 2.91033 3.53421 0.11145 87 U - - > 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 66 4.06947 0.10746 3.82060 2.76639 88 C - - > 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 67 0.50550 2.99557 1.25025 2.80752 89 A - - > 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 68 2.71582 0.47066 2.41737 1.51367 90 C - - > 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 69 1.85293 1.97437 2.24908 0.51270 91 U - - > 1.38629 1.38629 1.38629 1.38629 0.02670 4.32960 4.32960 1.46634 0.26236 1.09861 0.40547 70 2.00339 1.19666 1.75011 0.94375 92 u - - > 1.38629 1.38629 1.38629 1.38629 0.01344 4.31634 * 1.46634 0.26236 0.00000 * //