INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD99 ACC RF00608 DESC Small nucleolar RNA SNORD99 STATES 226 NODES 71 CLEN 74 W 91 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:50:09 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 23 EFFN 2.675659 CKSUM 3103451324 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 60.10 NC 59.90 EFP7GF -9.7384 0.71876 ECMLC 0.68726 -5.40645 2.84993 1600000 349532 0.003433 ECMGC 0.41255 -19.07524 -5.77978 1600000 96419 0.004149 ECMLI 0.63356 -3.44311 4.90990 1600000 238513 0.005031 ECMGI 0.44244 -13.28015 -1.89621 1600000 61584 0.006495 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 91 111 -7.121 -8.366 -0.067 -4.820 IL 1 1 2 1 4 1 28 92 113 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 29 93 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 77 - u - - MR 3 2 3 5 5 1 30 91 111 -7.322 -0.033 -7.138 -7.350 -8.241 -0.163 0.042 -0.885 0.619 D 4 2 3 5 5 0 23 90 110 -5.352 -0.707 -2.978 -4.409 -2.404 IR 5 5 3 5 5 1 27 91 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 1 76 g c - - MP 6 5 3 10 6 2 30 90 110 -9.220 -9.159 -0.041 -7.935 -5.777 -8.610 -2.004 -0.633 -2.169 1.531 -2.248 -2.190 1.234 -2.537 -2.254 2.049 -2.769 -0.217 1.076 -1.247 -0.378 -1.378 ML 7 5 3 10 6 1 25 89 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 24 88 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 19 86 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 26 90 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 27 89 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 75 C G - - MP 12 11 6 16 6 2 29 88 108 -9.198 -9.137 -0.020 -7.914 -8.194 -8.589 -5.016 -4.962 -4.625 -1.158 -3.248 -4.975 3.673 -4.105 -4.694 -0.975 -4.900 -2.918 0.214 -5.053 -0.970 -3.519 ML 13 11 6 16 6 1 24 87 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 24 87 107 -7.233 -5.962 -1.218 -5.941 -1.074 -4.154 0.179 -0.695 0.452 -0.181 D 15 11 6 16 6 0 19 84 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 26 88 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 26 87 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 74 U A - - MP 18 17 6 22 6 2 28 86 106 -9.220 -9.159 -0.020 -7.935 -8.215 -8.610 -4.566 -4.440 -4.523 -0.781 -3.656 -5.197 0.649 -4.288 -4.513 -0.571 -4.960 -2.393 3.579 -4.765 -1.328 -2.104 ML 19 17 6 22 6 1 23 85 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 22 85 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 19 82 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 25 86 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 25 85 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 73 G C - - MP 24 23 6 28 6 2 26 84 104 -9.220 -9.159 -0.020 -7.935 -8.215 -8.610 -5.250 -3.340 -5.414 -0.149 -5.944 -4.885 -1.181 -5.680 -4.643 3.739 -4.947 -1.063 -1.554 -4.796 -3.249 -4.283 ML 25 23 6 28 6 1 22 83 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 21 83 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 18 81 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 24 84 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 24 83 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 72 g c - - MP 30 29 6 34 4 2 24 82 102 -7.225 -7.432 -0.044 -5.846 -3.386 -2.438 -3.347 1.605 -3.758 -4.048 0.679 -3.770 -3.568 2.856 -3.953 0.181 0.378 -3.325 -0.623 -2.332 ML 31 29 6 34 4 1 21 82 103 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 4 1 19 82 102 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 33 29 6 34 4 0 18 81 101 -4.568 -4.250 -2.265 -0.520 IL 34 34 5 34 4 1 23 84 104 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 35 35 6 35 3 1 22 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - U - - - ML 36 35 6 38 3 1 23 80 100 -8.223 -0.017 -6.878 -1.095 -1.256 -1.412 1.453 D 37 35 6 38 3 0 17 78 99 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 22 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 7 - C - - - ML 39 38 3 41 3 1 22 79 99 -8.223 -0.017 -6.878 -1.680 1.531 -2.529 -0.678 D 40 38 3 41 3 0 16 77 98 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 21 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 8 - a - - - ML 42 41 3 44 3 1 21 78 98 -8.223 -0.017 -6.878 0.228 0.100 -0.584 0.125 D 43 41 3 44 3 0 16 76 97 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 20 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 9 - A - - - ML 45 44 3 47 3 1 20 77 97 -8.223 -0.017 -6.878 1.035 -1.299 -0.220 -0.543 D 46 44 3 47 3 0 15 75 96 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 19 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - g - - - ML 48 47 3 50 3 1 19 76 96 -8.223 -0.017 -6.878 -0.523 -1.138 0.571 0.448 D 49 47 3 50 3 0 14 74 95 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 19 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 11 - G - - - ML 51 50 3 53 3 1 19 75 95 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 52 50 3 53 3 0 13 73 93 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 18 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - A - - - ML 54 53 3 56 3 1 18 74 94 -8.223 -0.017 -6.878 1.811 -2.897 -2.478 -2.493 D 55 53 3 56 3 0 13 72 92 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 17 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 13 - U - - - ML 57 56 3 59 3 1 17 73 93 -8.223 -0.017 -6.878 -1.977 -1.889 -2.731 1.734 D 58 56 3 59 3 0 12 71 91 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 16 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - G - - - ML 60 59 3 62 3 1 16 72 92 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 61 59 3 62 3 0 11 70 90 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 15 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - A - - - ML 63 62 3 65 3 1 15 71 91 -8.223 -0.017 -6.878 1.811 -2.897 -2.478 -2.493 D 64 62 3 65 3 0 10 69 89 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 15 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - a - - - ML 66 65 3 68 3 1 14 70 90 -8.223 -0.017 -6.878 0.757 -0.182 -1.137 -0.038 D 67 65 3 68 3 0 10 68 88 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 14 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - a - - - ML 69 68 3 71 3 1 13 69 89 -8.223 -0.059 -4.767 0.708 -0.689 -0.863 0.259 D 70 68 3 71 3 0 9 67 87 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 13 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - C - - - ML 72 71 3 74 3 1 13 68 87 -8.182 -0.018 -6.836 -0.847 1.188 -1.834 -0.175 D 73 71 3 74 3 0 8 66 86 -6.566 -2.079 -0.410 IL 74 74 3 74 3 1 13 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - c - - - ML 75 74 3 77 3 1 12 66 86 -8.182 -0.070 -4.514 -0.323 0.832 -1.468 0.083 D 76 74 3 77 3 0 8 65 85 -6.566 -1.075 -0.958 IL 77 77 3 77 3 1 12 68 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 20 - u - - - ML 78 77 3 80 3 1 12 65 85 -8.174 -0.018 -6.828 -0.245 0.099 -1.024 0.672 D 79 77 3 80 3 0 7 64 84 -6.635 -2.148 -0.388 IL 80 80 3 80 3 1 11 67 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 21 - a - - - ML 81 80 3 83 3 1 11 64 84 -8.174 -0.018 -6.828 0.796 -1.000 -1.161 0.397 D 82 80 3 83 3 0 6 63 83 -6.635 -2.148 -0.388 IL 83 83 3 83 3 1 11 66 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 22 - a - - - ML 84 83 3 86 3 1 10 63 83 -8.174 -0.018 -6.828 0.915 -0.828 -1.138 0.134 D 85 83 3 86 3 0 6 62 82 -6.635 -1.002 -1.027 IL 86 86 3 86 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 23 - U - - - ML 87 86 3 89 3 1 9 62 82 -8.223 -0.017 -6.878 -0.339 -0.806 -1.482 1.189 D 88 86 3 89 3 0 5 61 81 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 9 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 24 - u - - - ML 90 89 3 92 3 1 8 61 81 -8.223 -0.055 -4.877 -0.006 0.181 -0.805 0.376 D 91 89 3 92 3 0 4 60 80 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 8 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 25 - u - - - ML 93 92 3 95 3 1 8 60 80 -4.451 -0.190 -3.686 0.150 -0.444 -0.907 0.698 D 94 92 3 95 3 0 3 58 78 -6.533 -2.046 -0.421 IL 95 95 3 95 3 1 8 61 81 -1.598 -0.692 -4.298 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - u - - - ML 96 95 3 98 3 1 8 59 79 -8.083 -0.019 -6.737 0.068 -0.233 -0.013 0.151 D 97 95 3 98 3 0 3 57 77 -7.193 -2.706 -0.252 IL 98 98 3 98 3 1 8 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - a - - - ML 99 98 3 101 3 1 7 58 78 -4.669 -0.072 -6.737 0.706 -0.904 -0.560 0.209 D 100 98 3 101 3 0 3 56 76 -7.193 -1.188 -0.851 IL 101 101 3 101 3 1 7 59 79 -1.566 -0.713 -4.266 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - G - - - ML 102 101 3 104 3 1 6 57 76 -8.164 -0.018 -6.818 -0.259 -1.628 1.193 -0.849 D 103 101 3 104 3 0 2 55 75 -6.708 -0.933 -1.099 IL 104 104 3 104 3 1 6 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - U - - - ML 105 104 3 107 3 1 5 56 75 -8.223 -0.017 -6.878 -0.768 -1.263 -1.836 1.441 D 106 104 3 107 3 0 1 54 74 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 5 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - G - - - ML 108 107 3 110 3 1 5 55 74 -8.223 -0.017 -6.878 -1.138 -2.053 1.482 -0.970 D 109 107 3 110 3 0 0 53 73 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 4 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - G - - - ML 111 110 3 113 3 1 4 54 73 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 112 110 3 113 3 0 0 52 72 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 3 56 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - A - - - ML 114 113 3 116 3 1 3 52 72 -8.223 -0.017 -6.878 1.510 -1.734 -1.684 -0.888 D 115 113 3 116 3 0 0 51 71 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 3 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - C - - - ML 117 116 3 119 3 1 2 51 71 -8.223 -0.148 -3.406 -0.818 1.066 -0.598 -0.560 D 118 116 3 119 3 0 0 50 70 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 3 54 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - A - - - ML 120 119 3 122 3 1 4 50 70 -8.094 -0.019 -6.748 1.520 -1.730 -1.632 -0.977 D 121 119 3 122 3 0 0 49 68 -7.137 -2.650 -0.263 IL 122 122 3 122 3 1 2 53 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - U - - - ML 123 122 3 125 3 1 3 49 69 -4.635 -0.073 -6.748 -0.902 -0.096 -1.661 1.146 D 124 122 3 125 3 0 0 48 67 -7.137 -0.630 -1.529 IL 125 125 3 125 3 1 1 51 70 -1.570 -0.710 -4.270 0.000 0.000 0.000 0.000 [ MATL 37 ] 39 - c - - - ML 126 125 3 128 3 1 2 48 68 -8.223 -0.017 -6.878 -0.691 0.649 -1.290 0.489 D 127 125 3 128 3 0 0 47 66 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 40 - u - - - ML 129 128 3 131 3 1 1 47 66 -8.223 -0.079 -4.330 -0.311 -0.823 0.006 0.700 D 130 128 3 131 3 0 0 46 65 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 41 - u - - - ML 132 131 3 134 3 1 1 46 65 -8.163 -0.018 -6.817 0.245 -0.061 -0.633 0.277 D 133 131 3 134 3 0 0 45 64 -6.716 -0.926 -1.108 IL 134 134 3 134 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - U - - - ML 135 134 3 137 3 1 1 45 64 -8.223 -0.017 -6.878 -1.563 -1.279 -2.306 1.608 D 136 134 3 137 3 0 0 44 63 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - G - - - ML 138 137 3 140 3 1 1 44 63 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 139 137 3 140 3 0 0 43 62 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - G - - - ML 141 140 3 143 3 1 1 43 62 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 142 140 3 143 3 0 0 41 61 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 45 - A - - - ML 144 143 3 146 3 1 1 42 61 -8.223 -0.017 -6.878 1.811 -2.897 -2.478 -2.493 D 145 143 3 146 3 0 0 40 60 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 46 - U - - - ML 147 146 3 149 3 1 1 41 60 -8.223 -0.017 -6.878 -1.977 -1.889 -2.731 1.734 D 148 146 3 149 3 0 0 39 59 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 43 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 47 - G - - - ML 150 149 3 152 3 1 1 40 59 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 151 149 3 152 3 0 0 38 58 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 48 - A - - - ML 153 152 3 155 3 1 1 39 58 -8.223 -0.017 -6.878 1.811 -2.897 -2.478 -2.493 D 154 152 3 155 3 0 0 37 57 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 49 - a - - - ML 156 155 3 158 3 1 1 37 57 -8.223 -0.017 -6.878 0.388 -0.580 -0.337 0.299 D 157 155 3 158 3 0 0 36 56 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 50 - a - - - ML 159 158 3 161 3 1 1 36 56 -8.223 -0.017 -6.878 0.722 -0.880 -0.139 -0.153 D 160 158 3 161 3 0 0 35 55 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 51 - a - - - ML 162 161 3 164 3 1 1 35 54 -8.223 -0.017 -6.878 0.429 0.386 -0.857 -0.331 D 163 161 3 164 3 0 0 34 53 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 52 - a - - - ML 165 164 3 167 3 1 1 34 53 -8.223 -0.017 -6.878 0.512 -0.686 -0.880 0.495 D 166 164 3 167 3 0 0 33 52 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 53 - U - - - ML 168 167 3 170 3 1 1 33 52 -8.223 -0.017 -6.878 -1.417 -1.016 -2.160 1.540 D 169 167 3 170 3 0 0 32 51 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 54 - G - - - ML 171 170 3 173 3 1 1 32 51 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 172 170 3 173 3 0 0 31 50 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 55 - C - - - ML 174 173 3 176 3 1 1 31 50 -8.223 -0.017 -6.878 -2.378 1.759 -3.208 -1.666 D 175 173 3 176 3 0 0 30 49 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 33 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 56 - G - - - ML 177 176 3 179 3 1 1 30 49 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 178 176 3 179 3 0 0 29 48 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 32 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 57 - G - - - ML 180 179 3 182 3 1 1 29 48 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 181 179 3 182 3 0 0 28 47 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 58 - A - - - ML 183 182 3 185 3 1 1 28 47 -8.223 -0.017 -6.878 1.811 -2.897 -2.478 -2.493 D 184 182 3 185 3 0 0 27 46 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 59 - U - - - ML 186 185 3 188 3 1 1 27 46 -8.223 -0.017 -6.878 -1.977 -1.889 -2.731 1.734 D 187 185 3 188 3 0 0 26 45 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 60 - A - - - ML 189 188 3 191 3 1 1 26 44 -8.223 -0.017 -6.878 1.811 -2.897 -2.478 -2.493 D 190 188 3 191 3 0 0 25 44 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 61 - U - - - ML 192 191 3 194 3 1 1 24 43 -8.223 -0.017 -6.878 -1.977 -1.889 -2.731 1.734 D 193 191 3 194 3 0 0 23 42 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 62 - G - - - ML 195 194 3 197 3 1 1 23 42 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 196 194 3 197 3 0 0 22 41 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 63 - G - - - ML 198 197 3 200 3 1 1 22 41 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 199 197 3 200 3 0 0 21 40 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 64 - G - - - ML 201 200 3 203 3 1 1 21 40 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 202 200 3 203 3 0 0 20 39 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 65 - A - - - ML 204 203 3 206 3 1 1 20 38 -8.223 -0.017 -6.878 1.516 -1.979 -0.902 -1.510 D 205 203 3 206 3 0 0 19 38 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 66 - C - - - ML 207 206 3 209 3 1 1 19 37 -8.223 -0.017 -6.878 -2.378 1.759 -3.208 -1.666 D 208 206 3 209 3 0 0 18 37 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 67 - U - - - ML 210 209 3 212 3 1 1 17 36 -8.223 -0.017 -6.878 -1.977 -1.889 -2.731 1.734 D 211 209 3 212 3 0 0 17 36 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 68 - G - - - ML 213 212 3 215 3 1 1 16 35 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 214 212 3 215 3 0 0 16 34 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 69 - A - - - ML 216 215 3 218 3 1 1 15 33 -8.223 -0.017 -6.878 1.811 -2.897 -2.478 -2.493 D 217 215 3 218 3 0 0 15 33 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 70 - G - - - ML 219 218 3 221 3 1 1 13 31 -8.223 -0.017 -6.878 -2.124 -3.420 1.821 -2.806 D 220 218 3 221 3 0 0 13 32 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 71 - A - - - ML 222 221 3 224 2 1 1 1 1 * 0.000 1.399 -1.252 -1.097 -1.072 D 223 221 3 224 2 0 0 0 0 * 0.000 IL 224 224 3 224 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 70 ] - - - - - - E 225 224 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD99 ACC RF00608 DESC Small nucleolar RNA SNORD99 LENG 74 MAXL 156 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:50:09 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 23 EFFN 2.978882 CKSUM 3103451324 STATS LOCAL MSV -8.1696 0.71876 STATS LOCAL VITERBI -9.0177 0.71876 STATS LOCAL FORWARD -3.6639 0.71876 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.31701 1.70694 1.21558 1.37000 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 0.00000 * 1 1.36863 1.69808 1.09901 1.47268 1 g - - < 1.38629 1.38629 1.38629 1.38629 0.07034 4.13539 2.95793 1.46634 0.26236 1.09861 0.40547 2 3.41268 0.19261 3.21668 2.28123 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.03375 4.09880 4.09880 1.46634 0.26236 0.48003 0.96434 3 3.23547 2.38600 3.01022 0.19921 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 4 2.76777 3.52093 0.13226 3.45725 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 5 1.53100 2.22914 0.61703 1.99131 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 6 2.22222 2.32290 2.41175 0.35100 6 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 7 2.65873 0.29674 3.25240 1.91024 7 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 8 1.22932 1.30487 1.79659 1.30772 8 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 9 0.65207 2.32813 1.53776 1.79160 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 10 1.78932 2.21825 0.96570 1.06883 10 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 11 2.98750 3.90148 0.10716 3.47409 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 12 0.11409 3.52451 3.22155 3.25812 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 13 2.88086 2.79956 3.40777 0.16256 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 14 2.98750 3.90148 0.10716 3.47409 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 15 0.11409 3.52451 3.22155 3.25812 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 16 0.84732 1.50717 2.20860 1.42691 16 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 17 0.88296 1.87986 2.00323 1.20754 17 a - - _ 1.38629 1.38629 1.38629 1.38629 0.06508 4.13539 3.05735 1.46634 0.26236 1.09861 0.40547 18 2.02603 0.53236 2.73055 1.53369 18 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03357 4.10388 4.10388 1.46634 0.26236 1.59714 0.22624 19 1.63421 0.78175 2.45567 1.34138 19 c - - _ 1.38629 1.38629 1.38629 1.38629 0.07433 4.10388 2.89811 1.46634 0.26236 0.51911 0.90400 20 1.57226 1.30487 2.11645 0.91440 20 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03380 4.09725 4.09725 1.46634 0.26236 1.67510 0.20738 21 0.81932 2.11417 2.22683 1.10665 21 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03380 4.09725 4.09725 1.46634 0.26236 1.67510 0.20738 22 0.73475 1.98228 2.20991 1.29862 22 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03380 4.09725 4.09725 1.46634 0.26236 0.46933 0.98195 23 1.64380 1.97656 2.46448 0.53930 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 24 1.39755 1.24656 1.95575 1.12748 24 u - - _ 1.38629 1.38629 1.38629 1.38629 0.06194 4.13539 3.12209 1.46634 0.26236 1.09861 0.40547 25 1.28188 1.70185 2.03017 0.89447 25 u - - _ 1.38629 1.38629 1.38629 1.38629 0.16904 2.76357 2.38101 0.45918 0.99913 1.55913 0.23613 26 1.34645 1.54413 1.38434 1.28789 27 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03627 4.02788 4.02788 1.46634 0.26236 2.23776 0.11283 27 0.88559 2.03805 1.78280 1.24106 28 a - - _ 1.38629 1.38629 1.38629 1.38629 0.07817 2.85803 4.02788 0.53582 0.87994 0.71302 0.67366 28 1.59169 2.56956 0.53282 2.01816 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03405 4.08993 4.08993 1.46634 0.26236 0.42483 1.06097 29 1.96504 2.32662 2.73583 0.36042 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 30 2.25496 2.89547 0.33135 2.10458 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 31 2.98750 3.90148 0.10716 3.47409 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 32 0.31777 2.65342 2.62497 2.04504 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 33 2.02515 0.60727 1.81259 1.83282 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.13505 4.13539 2.20430 1.46634 0.26236 1.09861 0.40547 34 0.31004 2.65002 2.58725 2.11439 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03596 4.03631 4.03631 1.46634 0.26236 2.18572 0.11923 35 2.06978 1.45116 2.59970 0.57059 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.07896 2.84279 4.03631 0.52471 0.89581 0.25463 1.49257 36 1.91030 0.91101 2.31712 1.04614 39 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 37 1.62454 1.98180 1.36913 0.88953 40 u - - _ 1.38629 1.38629 1.38629 1.38629 0.08044 4.13539 2.79204 1.46634 0.26236 1.09861 0.40547 38 1.21612 1.42116 1.83206 1.19698 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03409 4.08903 4.08903 1.46634 0.26236 0.41999 1.07019 39 2.56336 2.32916 3.07990 0.24896 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 40 2.98750 3.90148 0.10716 3.47409 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 41 2.98750 3.90148 0.10716 3.47409 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 42 0.11409 3.52451 3.22155 3.25812 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 43 2.88086 2.79956 3.40777 0.16256 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 44 2.98750 3.90148 0.10716 3.47409 47 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 45 0.11409 3.52451 3.22155 3.25812 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 46 1.11317 1.79821 1.61897 1.17835 49 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 47 0.87627 2.01497 1.47865 1.50328 50 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 48 1.08308 1.09864 1.99985 1.64625 51 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 49 1.02248 1.87950 2.01344 1.03816 52 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 50 2.45548 2.13262 2.97215 0.29510 53 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 51 2.98750 3.90148 0.10716 3.47409 54 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 52 3.19090 0.14350 3.76306 2.66885 55 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 53 2.98750 3.90148 0.10716 3.47409 56 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 54 2.98750 3.90148 0.10716 3.47409 57 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 55 0.11409 3.52451 3.22155 3.25812 58 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 56 2.88086 2.79956 3.40777 0.16256 59 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 57 0.11409 3.52451 3.22155 3.25812 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 58 2.88086 2.79956 3.40777 0.16256 61 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 59 2.98750 3.90148 0.10716 3.47409 62 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 60 2.98750 3.90148 0.10716 3.47409 63 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 61 2.98750 3.90148 0.10716 3.47409 64 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 62 0.31480 2.83654 2.03134 2.52230 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 63 3.19090 0.14350 3.76306 2.66885 66 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 64 2.88086 2.79956 3.40777 0.16256 67 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 65 2.98750 3.90148 0.10716 3.47409 68 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 66 0.11409 3.52451 3.22155 3.25812 69 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 67 2.98750 3.90148 0.10716 3.47409 70 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 68 0.39505 2.28386 2.18213 2.19228 71 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 69 2.35784 0.73364 1.92834 1.27358 72 c - - > 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 70 3.60720 0.16031 3.34543 2.45634 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 71 0.23585 3.17234 2.21209 2.83494 74 A - - > 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 72 2.52837 3.34618 0.17288 3.12912 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 73 1.75513 1.07246 1.53529 1.31098 76 c - - > 1.38629 1.38629 1.38629 1.38629 0.03252 4.13539 4.13539 1.46634 0.26236 1.09861 0.40547 74 1.51106 1.34673 2.01340 0.95269 77 u - - : 1.38629 1.38629 1.38629 1.38629 0.01639 4.11926 * 1.46634 0.26236 0.00000 * //