INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD65 ACC RF00571 DESC Small nucleolar RNA SNORD65 STATES 223 NODES 75 CLEN 73 W 153 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:48:38 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 26 EFFN 3.862549 CKSUM 3690340972 NULL 0.000 0.000 0.000 0.000 GA 41.00 TC 41.70 NC 40.60 EFP7GF -10.0448 0.71869 ECMLC 0.66372 -9.34554 0.03471 1600000 606797 0.001978 ECMGC 0.40783 -16.80053 -4.23253 1600000 67312 0.005942 ECMLI 0.58178 -8.21319 1.67495 1600000 378071 0.003174 ECMGI 0.44962 -9.09452 1.71068 1600000 51516 0.007765 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 153 236 -7.579 -7.786 -0.034 -6.200 IL 1 1 2 1 4 2 31 155 239 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 2 30 155 238 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 3 30 153 237 -5.922 -0.048 -5.922 0.656 -0.184 -0.391 -0.358 D 4 2 3 5 3 0 25 150 233 -11.551 -1.585 -0.585 IL 5 5 3 5 3 4 32 160 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 2 30 152 235 -5.922 -0.048 -5.922 1.027 -0.703 -0.754 -0.405 D 7 5 3 8 3 0 25 149 232 -11.551 -1.585 -0.585 IL 8 8 3 8 3 3 31 159 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 2 29 151 234 -5.922 -0.048 -5.922 0.927 -1.144 -0.021 -0.599 D 10 8 3 11 3 0 24 148 231 -11.551 -1.585 -0.585 IL 11 11 3 11 3 3 30 157 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 2 28 150 232 -5.922 -0.048 -5.922 -2.378 -1.927 -2.563 1.755 D 13 11 3 14 3 0 23 147 229 -11.551 -1.585 -0.585 IL 14 14 3 14 3 3 30 156 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - G - - - ML 15 14 3 17 3 1 27 148 231 -5.922 -0.048 -5.922 -1.269 -2.697 1.696 -2.386 D 16 14 3 17 3 0 22 145 228 -11.551 -1.585 -0.585 IL 17 17 3 17 3 2 29 155 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 27 147 230 -5.922 -0.048 -5.922 1.849 -3.092 -2.796 -2.876 D 19 17 3 20 3 0 22 144 226 -11.551 -1.585 -0.585 IL 20 20 3 20 3 2 28 154 237 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 26 146 228 -5.922 -0.048 -5.922 -2.378 -1.927 -2.563 1.755 D 22 20 3 23 3 0 21 143 225 -11.551 -1.585 -0.585 IL 23 23 3 23 3 2 28 152 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 25 145 227 -5.922 -0.048 -5.922 -1.332 -2.731 1.707 -2.422 D 25 23 3 26 3 0 20 141 224 -11.551 -1.585 -0.585 IL 26 26 3 26 3 2 27 151 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 24 143 225 -5.922 -0.048 -5.922 1.529 -1.098 -1.819 -1.459 D 28 26 3 29 3 0 20 140 222 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 26 150 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - a - - - ML 30 29 3 32 3 1 24 142 224 -5.922 -0.048 -5.922 0.809 -1.092 0.094 -0.492 D 31 29 3 32 3 0 19 139 221 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 25 149 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 23 141 223 -5.922 -0.048 -5.922 1.301 -0.938 -0.947 -1.013 D 34 32 3 35 3 0 18 138 219 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 25 147 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - u - - - ML 36 35 3 38 3 1 22 139 221 -5.922 -0.048 -5.922 -0.345 -0.521 -0.770 0.948 D 37 35 3 38 3 0 17 136 218 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 24 146 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - c - - - ML 39 38 3 41 3 1 22 138 220 -5.922 -0.048 -5.922 -0.476 0.965 -1.295 -0.118 D 40 38 3 41 3 0 17 135 216 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 23 145 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 42 41 3 44 3 1 21 137 218 -3.243 -0.188 -5.922 1.081 -0.844 -0.652 -0.533 D 43 41 3 44 3 0 16 134 215 -11.551 -1.585 -0.585 IL 44 44 3 44 3 2 22 139 220 -0.697 -1.384 -13.799 0.000 0.000 0.000 0.000 [ MATL 15 ] 18 - C - - - ML 45 44 3 47 3 1 20 135 217 -5.922 -0.048 -5.922 -0.710 1.454 -1.988 -1.330 D 46 44 3 47 3 0 15 132 214 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 22 142 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 19 - C - - - ML 48 47 3 50 3 1 20 134 215 -5.922 -0.048 -5.922 -2.039 1.508 -2.271 -0.505 D 49 47 3 50 3 0 15 131 212 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 21 141 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 20 - c - - - ML 51 50 3 53 3 1 19 133 214 -5.922 -0.048 -5.922 -0.425 0.598 -0.531 0.069 D 52 50 3 53 3 0 14 130 211 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 21 140 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 21 - A - - - ML 54 53 3 56 3 1 18 132 213 -3.285 -0.183 -5.922 1.115 -0.424 -0.924 -0.831 D 55 53 3 56 3 0 13 129 210 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 19 131 213 -4.776 -0.054 -12.420 0.000 0.000 0.000 0.000 [ MATL 19 ] 23 - A - - - ML 57 56 3 59 3 1 18 130 211 -5.922 -0.048 -5.922 1.849 -3.092 -2.796 -2.876 D 58 56 3 59 3 0 13 127 208 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 19 137 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 24 - A - - - ML 60 59 3 62 3 1 17 129 210 -5.922 -0.048 -5.922 1.849 -3.092 -2.796 -2.876 D 61 59 3 62 3 0 12 126 207 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 19 136 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 25 - A - - - ML 63 62 3 65 3 1 16 128 209 -5.922 -0.048 -5.922 1.417 -1.177 -1.141 -1.204 D 64 62 3 65 3 0 12 125 205 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 18 135 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 26 - U - - - ML 66 65 3 68 3 1 16 127 207 -5.922 -0.048 -5.922 -0.810 -0.461 -1.370 1.212 D 67 65 3 68 3 0 11 123 204 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 17 133 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 27 - A - - - ML 69 68 3 71 3 1 15 125 206 -5.922 -0.048 -5.922 1.849 -3.092 -2.796 -2.876 D 70 68 3 71 3 0 10 122 202 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 17 132 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 28 - G - - - ML 72 71 3 74 3 1 14 124 204 -5.922 -0.048 -5.922 -2.269 -3.235 1.831 -2.961 D 73 71 3 74 3 0 10 121 201 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 16 131 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 29 - C - - - ML 75 74 3 77 3 1 14 123 203 -5.922 -0.048 -5.922 -2.640 1.782 -2.876 -1.913 D 76 74 3 77 3 0 9 119 199 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 15 129 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 30 - U - - - ML 78 77 3 80 3 1 13 121 201 -5.922 -0.048 -5.922 -2.378 -1.927 -2.563 1.755 D 79 77 3 80 3 0 8 118 198 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 15 128 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 31 - G - - - ML 81 80 3 83 3 1 13 120 200 -5.922 -0.048 -5.922 -1.208 -2.664 1.684 -2.351 D 82 80 3 83 3 0 8 117 196 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 14 127 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 32 - G - - - ML 84 83 3 86 3 1 12 119 198 -5.922 -0.048 -5.922 -1.594 -2.313 1.637 -1.486 D 85 83 3 86 3 0 7 115 195 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 13 126 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 33 - A - - - ML 87 86 3 89 3 1 11 117 197 -5.922 -0.048 -5.922 1.849 -3.092 -2.796 -2.876 D 88 86 3 89 3 0 7 114 193 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 13 124 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 34 - A - - - ML 90 89 3 92 3 1 11 116 195 -5.922 -0.048 -5.922 1.849 -3.092 -2.796 -2.876 D 91 89 3 92 3 0 6 113 192 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 12 123 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 35 - U - - - ML 93 92 3 95 3 1 10 115 194 -5.922 -0.048 -5.922 -2.378 -1.927 -2.563 1.755 D 94 92 3 95 3 0 5 111 190 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 12 122 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 36 - U - - - ML 96 95 3 98 3 1 10 113 192 -5.922 -0.048 -5.922 -1.865 -0.892 -2.072 1.560 D 97 95 3 98 3 0 5 110 189 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 11 120 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 37 - A - - - ML 99 98 3 101 3 1 9 112 191 -5.922 -0.048 -5.922 1.849 -3.092 -2.796 -2.876 D 100 98 3 101 3 0 4 109 187 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 11 119 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 38 - C - - - ML 102 101 3 104 3 1 9 111 189 -5.922 -0.048 -5.922 -2.640 1.782 -2.876 -1.913 D 103 101 3 104 3 0 4 107 186 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 10 118 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 39 - C - - - ML 105 104 3 107 3 1 8 109 188 -5.922 -0.048 -5.922 -1.914 1.412 -2.136 -0.240 D 106 104 3 107 3 0 3 106 184 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 9 116 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 40 - G - - - ML 108 107 3 110 3 1 7 108 186 -5.922 -0.048 -5.922 -0.634 -2.354 1.543 -2.018 D 109 107 3 110 3 0 3 105 183 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 9 115 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 41 - G - - - ML 111 110 3 113 3 1 7 106 185 -5.922 -0.048 -5.922 -1.643 -2.391 1.662 -1.627 D 112 110 3 113 3 0 2 103 181 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 8 114 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 42 - C - - - ML 114 113 3 116 3 1 6 105 183 -5.922 -0.048 -5.922 -2.640 1.782 -2.876 -1.913 D 115 113 3 116 3 0 2 102 180 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 8 112 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 43 - A - - - ML 117 116 3 119 3 1 6 104 182 -5.922 -0.048 -5.922 1.849 -3.092 -2.796 -2.876 D 118 116 3 119 3 0 1 100 178 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 7 111 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 44 - G - - - ML 120 119 3 122 3 1 5 102 180 -5.922 -0.048 -5.922 -1.208 -2.664 1.684 -2.351 D 121 119 3 122 3 0 1 99 177 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 6 110 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 45 - A - - - ML 123 122 3 125 3 1 4 101 179 -5.922 -0.048 -5.922 1.849 -3.092 -2.796 -2.876 D 124 122 3 125 3 0 1 98 175 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 6 108 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 46 - U - - - ML 126 125 3 128 3 1 4 99 177 -5.922 -0.048 -5.922 -1.345 -1.329 -0.531 1.331 D 127 125 3 128 3 0 0 96 174 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 5 107 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 47 - U - - - ML 129 128 3 131 3 1 3 98 175 -5.922 -0.048 -5.922 -1.360 -1.338 -0.563 1.344 D 130 128 3 131 3 0 0 95 172 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 4 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 48 - G - - - ML 132 131 3 134 3 1 2 97 174 -5.922 -0.263 -2.734 -0.347 -0.924 1.060 -0.731 D 133 131 3 134 3 0 0 94 171 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 4 104 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 49 - U - - - ML 135 134 3 137 3 1 2 95 172 -5.715 -0.056 -5.715 -0.587 -1.142 -1.375 1.319 D 136 134 3 137 3 0 0 93 170 -13.440 -0.486 -1.807 IL 137 137 3 137 3 1 3 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 50 - g - - - ML 138 137 3 140 3 1 2 94 171 -5.894 -0.049 -5.894 -0.098 -0.577 0.696 -0.367 D 139 137 3 140 3 0 0 91 168 -12.028 -0.941 -1.062 IL 140 140 3 140 3 1 3 102 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 51 - U - - - ML 141 140 3 143 3 1 2 93 169 -5.922 -0.048 -5.922 -1.524 0.248 -1.715 1.111 D 142 140 3 143 3 0 0 89 165 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 3 100 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 52 - a - - - ML 144 143 3 146 3 1 1 91 167 -5.922 -0.048 -5.922 0.891 -0.669 -0.154 -0.694 D 145 143 3 146 3 0 0 88 164 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 2 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 53 - G - - - ML 147 146 3 149 3 1 1 90 166 -5.922 -0.048 -5.922 -1.240 -2.682 1.690 -2.369 D 148 146 3 149 3 0 0 86 162 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 2 97 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 54 - U - - - ML 150 149 3 152 3 1 1 88 164 -5.922 -0.048 -5.922 -1.887 -0.943 -2.095 1.573 D 151 149 3 152 3 0 0 85 160 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 2 96 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 55 - G - - - ML 153 152 3 155 3 1 1 87 162 -5.922 -0.048 -5.922 -1.269 -2.697 1.696 -2.386 D 154 152 3 155 3 0 0 83 159 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 2 95 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 56 - G - - - ML 156 155 3 158 3 1 1 85 161 -5.922 -0.048 -5.922 -0.970 -1.925 1.471 -1.139 D 157 155 3 158 3 0 0 82 157 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 93 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 57 - U - - - ML 159 158 3 161 3 1 1 84 159 -5.922 -0.048 -5.922 -1.877 -0.919 -2.084 1.567 D 160 158 3 161 3 0 0 80 155 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 58 - G - - - ML 162 161 3 164 3 1 1 82 157 -5.922 -0.048 -5.922 -0.675 -2.377 1.555 -2.042 D 163 161 3 164 3 0 0 79 153 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 59 - A - - - ML 165 164 3 167 3 1 1 81 155 -5.922 -0.081 -4.704 1.849 -3.092 -2.796 -2.876 D 166 164 3 167 3 0 0 78 152 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 60 - a - - - ML 168 167 3 170 3 1 1 79 154 -5.890 -0.049 -5.890 0.452 -0.471 0.347 -0.647 D 169 167 3 170 3 0 0 76 151 -12.079 -0.896 -1.113 IL 170 170 3 170 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 61 - C - - - ML 171 170 3 173 3 1 1 78 152 -5.922 -0.048 -5.922 -1.736 1.222 -1.943 0.147 D 172 170 3 173 3 0 0 74 148 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 86 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 62 - C - - - ML 174 173 3 176 3 1 1 76 150 -5.922 -0.131 -3.835 -0.821 1.254 -1.129 -0.756 D 175 173 3 176 3 0 0 73 147 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 85 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 63 - U - - - ML 177 176 3 179 3 1 1 74 148 -5.842 -0.051 -5.842 -1.475 -0.077 -1.665 1.249 D 178 176 3 179 3 0 0 72 146 -12.609 -0.557 -1.644 IL 179 179 3 179 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 64 - a - - - ML 180 179 3 182 3 1 1 73 146 -4.562 -0.358 -2.493 0.681 -0.839 0.314 -0.750 D 181 179 3 182 3 0 0 70 144 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 73 147 -3.191 -0.168 -10.835 0.000 0.000 0.000 0.000 [ MATL 61 ] 66 - u - - - ML 183 182 3 185 3 1 1 72 146 -5.668 -0.058 -5.668 -0.400 0.122 -0.645 0.599 D 184 182 3 185 3 0 0 69 142 -13.640 -0.996 -1.004 IL 185 185 3 185 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 67 - G - - - ML 186 185 3 188 3 1 1 70 143 -5.814 -0.052 -5.814 -0.657 -2.213 1.525 -1.878 D 187 185 3 188 3 0 0 68 141 -12.847 -0.457 -1.881 IL 188 188 3 188 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 68 - G - - - ML 189 188 3 191 3 1 1 69 141 -5.922 -0.048 -5.922 -0.632 -1.718 1.341 -0.950 D 190 188 3 191 3 0 0 65 137 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 78 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 69 - U - - - ML 192 191 3 194 3 1 1 67 139 -5.922 -0.048 -5.922 -2.378 -1.927 -2.563 1.755 D 193 191 3 194 3 0 0 63 135 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 70 - U - - - ML 195 194 3 197 3 1 1 65 137 -5.922 -0.048 -5.922 -1.940 -1.064 -2.149 1.602 D 196 194 3 197 3 0 0 61 133 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 71 - U - - - ML 198 197 3 200 3 1 1 63 135 -5.922 -0.048 -5.922 -1.785 -0.694 -1.989 1.506 D 199 197 3 200 3 0 0 59 130 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 73 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 72 - U - - - ML 201 200 3 203 3 1 1 61 133 -5.922 -0.048 -5.922 -1.943 -1.070 -2.152 1.603 D 202 200 3 203 3 0 0 57 128 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 73 - C - - - ML 204 203 3 206 3 1 1 59 130 -5.922 -0.048 -5.922 -2.640 1.782 -2.876 -1.913 D 205 203 3 206 3 0 0 54 125 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 74 - U - - - ML 207 206 3 209 3 1 1 57 128 -5.922 -0.048 -5.922 -2.378 -1.927 -2.563 1.755 D 208 206 3 209 3 0 0 52 122 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 68 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 75 - G - - - ML 210 209 3 212 3 1 1 54 125 -5.922 -0.048 -5.922 -2.269 -3.235 1.831 -2.961 D 211 209 3 212 3 0 0 48 118 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 76 - A - - - ML 213 212 3 215 3 1 1 52 121 -5.922 -0.126 -3.902 1.849 -3.092 -2.796 -2.876 D 214 212 3 215 3 0 0 44 113 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 77 - A - - - ML 216 215 3 218 3 1 1 48 117 -5.847 -0.051 -5.847 1.308 -1.695 -0.279 -1.357 D 217 215 3 218 3 0 0 29 99 -12.564 -2.599 -0.261 IL 218 218 3 218 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 78 - G - - - ML 219 218 3 221 2 1 1 1 1 * 0.000 -1.275 -1.743 1.395 -0.603 D 220 218 3 221 2 0 0 0 0 * 0.000 IL 221 221 3 221 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 74 ] - - - - - - E 222 221 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD65 ACC RF00571 DESC Small nucleolar RNA SNORD65 LENG 73 MAXL 153 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Thu Feb 20 18:48:38 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 26 EFFN 3.862549 STATS LOCAL MSV -7.9723 0.71869 STATS LOCAL VITERBI -9.2109 0.71869 STATS LOCAL FORWARD -3.8260 0.71869 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.22853 1.66256 1.37124 1.33244 1.38629 1.38629 1.38629 1.38629 0.01942 5.25357 4.26839 0.39730 1.11515 0.00000 * 1 0.93125 1.51355 1.65704 1.63420 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 2 0.67440 1.87363 1.90923 1.66719 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 3 0.74348 2.17937 1.40077 1.80166 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 4 3.03437 2.72195 3.16304 0.16978 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 5 2.26585 3.25586 0.21087 3.04013 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 6 0.10466 3.52922 3.32435 3.37996 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 7 3.03437 2.72195 3.16304 0.16978 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 8 2.30936 3.27907 0.20289 3.06527 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 9 0.32646 2.14769 2.64716 2.39780 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 10 0.82524 2.14339 1.32098 1.72742 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 11 0.48460 2.03633 2.04283 2.08837 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 12 1.62574 1.74738 1.91974 0.72907 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 13 1.71592 0.71761 2.28404 1.46788 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 14 0.63695 1.97152 1.83806 1.75606 - A - - : 1.38629 1.38629 1.38629 1.38629 0.13021 2.24813 4.10472 0.95917 0.48323 1.09861 0.40547 15 1.87854 0.37879 2.76407 2.30800 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 16 2.79984 0.34072 2.96028 1.73660 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 17 1.68096 0.97151 1.75449 1.33826 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 18 0.61365 1.68024 2.02650 1.96253 - A - - : 1.38629 1.38629 1.38629 1.38629 0.12677 2.27725 4.10472 0.03719 3.31020 1.09861 0.40547 19 0.10466 3.52922 3.32435 3.37996 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 20 0.10466 3.52922 3.32435 3.37996 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 21 0.40420 2.20205 2.17702 2.22070 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 22 1.94754 1.70558 2.33610 0.54644 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 23 0.10466 3.52922 3.32435 3.37996 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 24 2.95924 3.62886 0.11712 3.43844 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 25 3.21642 0.15145 3.37970 2.71233 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 26 3.03437 2.72195 3.16304 0.16978 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 27 2.22336 3.23318 0.21902 3.01558 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 28 2.49137 2.98924 0.25150 2.41634 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 29 0.10466 3.52922 3.32435 3.37996 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10471 4.10471 1.46634 0.26236 1.09861 0.40547 30 0.10466 3.52922 3.32435 3.37996 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 31 3.03437 2.72195 3.16304 0.16978 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 32 2.67915 2.00463 2.82261 0.30487 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 33 0.10466 3.52922 3.32435 3.37996 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 34 3.21642 0.15145 3.37970 2.71233 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 35 2.71331 0.40776 2.86660 1.55282 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 36 1.82562 3.01823 0.31709 2.78500 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 37 2.52493 3.04374 0.23403 2.51399 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 38 3.21642 0.15145 3.37970 2.71233 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 39 0.10466 3.52922 3.32435 3.37996 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 40 2.22336 3.23318 0.21902 3.01558 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 41 0.10466 3.52922 3.32435 3.37996 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 42 2.31851 2.30740 1.75407 0.46364 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 43 2.32928 2.31367 1.77671 0.45485 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 44 1.62688 2.02642 0.65186 1.89329 - G - - : 1.38629 1.38629 1.38629 1.38629 0.18247 4.10472 1.89513 1.46634 0.26236 1.09861 0.40547 45 1.79301 2.17757 2.33937 0.47187 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03883 3.96107 3.96107 1.46634 0.26236 0.33659 1.25247 46 1.45420 1.78647 0.90374 1.64087 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03422 4.08513 4.08513 1.46634 0.26236 0.65192 0.73615 47 2.44255 1.21454 2.57500 0.61607 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 48 0.76902 1.85003 1.49292 1.86700 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 49 2.24594 3.24523 0.21464 3.02862 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 50 2.69433 2.04019 2.83820 0.29588 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 51 2.26585 3.25586 0.21087 3.04013 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 52 2.05854 2.72070 0.36667 2.17600 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 53 2.68721 2.02360 2.83090 0.30004 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 54 1.85421 3.03402 0.30843 2.80174 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 55 0.10466 3.52922 3.32435 3.37996 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05641 4.10472 3.26088 1.46634 0.26236 1.09861 0.40547 56 1.07285 1.71304 1.14565 1.83489 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03431 4.08261 4.08261 1.46634 0.26236 0.62064 0.77133 57 2.58935 0.53950 2.73289 1.28425 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 58 1.95513 0.51733 2.16894 1.91025 - C - - : 1.38629 1.38629 1.38629 1.38629 0.09054 4.10472 2.65836 1.46634 0.26236 1.09861 0.40547 59 2.40883 1.43991 2.54034 0.52039 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03548 4.04966 4.04966 1.46634 0.26236 0.38584 1.13905 60 0.91426 1.96757 1.16890 1.90594 - a - - : 1.38629 1.38629 1.38629 1.38629 0.24837 3.16239 1.72819 0.11601 2.21153 1.09861 0.40547 61 1.66384 1.30203 1.83372 0.97077 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04012 3.92904 3.92904 1.46634 0.26236 0.69031 0.69599 62 1.84152 2.92027 0.32922 2.68796 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03620 4.02998 4.02998 1.46634 0.26236 0.31681 1.30367 63 1.82407 2.57700 0.45696 2.04466 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 64 3.03437 2.72195 3.16304 0.16978 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 65 2.73112 2.12360 2.87569 0.27592 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 66 2.62348 1.86751 2.76487 0.34255 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 67 2.73325 2.12830 2.87784 0.27484 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 68 3.21642 0.15145 3.37970 2.71233 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 69 3.03437 2.72195 3.16304 0.16978 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 70 2.95924 3.62886 0.11712 3.43844 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03355 4.10472 4.10472 1.46634 0.26236 1.09861 0.40547 71 0.10466 3.52922 3.32435 3.37996 - A - - : 1.38629 1.38629 1.38629 1.38629 0.08708 4.10472 2.70451 1.46634 0.26236 1.09861 0.40547 72 0.47948 2.56088 1.57973 2.32658 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03536 4.05299 4.05299 1.46634 0.26236 1.80105 0.18047 73 2.26995 2.59454 0.41950 1.80408 - G - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99936 0.00000 * //