{"rfam": {"acc": "RF00362", "id": "Pospi_RY", "description": "Pospiviroid RY motif stem loop", "comment": "This family consists of several Pospiviroid sequences which are related to the potato spindle tuber viroid (PSTVd) RY motif stem-loop. The RY motif (5'-ACAGG and CUCUUCC-5') in PSTVd, is thought to bind with the tomato protein Virp1. The exact function of this motif and the significance of Virp1 binding is unknown. It is however thought that RY motifs are essential for establishing a viroid infection [1].", "curation": {"author": "Moxon SJ", "seed_source": "PMID:14500815", "num_seed": 16, "num_full": 1, "num_species": 5, "type": "Cis-reg;", "structure_source": "Published; PMID:14500815"}, "cm": {"build_command": "cmbuild -F CM SEED", "calibrate_command": "cmcalibrate --mpi CM", "search_command": "cmsearch --cpu 4 --verbose --nohmmonly -T 29.40 -Z 2958934 CM SEQDB", "cutoffs": {"gathering": 40.0, "trusted": 43.1, "noise": 39.5}}, "release": {"date": "2026-01-16", "number": "15.1"}, "clan": {"acc": null, "id": null}}}