INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD36 ACC RF00049 DESC Small nucleolar RNA SNORD36 STATES 235 NODES 75 CLEN 77 W 103 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:12:43 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 59 EFFN 8.127625 CKSUM 1391374280 NULL 0.000 0.000 0.000 0.000 GA 37.00 TC 37.00 NC 36.90 EFP7GF -10.7939 0.71863 ECMLC 0.56940 -7.73083 2.23234 1600000 349101 0.003437 ECMGC 0.35426 -16.40225 -1.58702 1600000 76106 0.005256 ECMLI 0.51485 -5.04282 5.30862 1600000 247599 0.004847 ECMGI 0.41621 -9.53977 2.33924 1600000 56139 0.007125 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 103 131 -8.252 -9.498 -0.106 -3.915 IL 1 1 2 1 4 4 32 104 132 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 5 34 105 132 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 93 - a - - MR 3 2 3 5 5 7 35 103 131 -8.302 -0.017 -8.117 -8.329 -9.221 0.495 -0.818 -0.637 0.466 D 4 2 3 5 5 1 28 101 129 -6.011 -0.987 -3.637 -1.837 -3.063 IR 5 5 3 5 5 4 32 103 131 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 1 92 u a - - MP 6 5 3 10 6 7 35 102 130 -9.816 -9.756 -0.013 -8.532 -8.812 -9.207 -1.954 -2.153 -2.147 0.991 -1.047 -2.998 1.361 -2.258 -2.210 1.081 -2.781 0.298 2.013 -1.596 0.386 -0.900 ML 7 5 3 10 6 3 29 100 128 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 3 29 101 128 -7.503 -6.232 -0.923 -6.210 -1.344 -4.424 0.307 -0.156 -0.638 0.291 D 9 5 3 10 6 0 24 97 125 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 3 31 102 129 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 3 31 101 129 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 91 u a - - MP 12 11 6 16 6 7 33 100 128 -9.849 -9.788 -0.013 -8.565 -8.844 -9.239 -1.374 -1.275 -2.198 1.227 -2.146 -3.049 1.403 -2.519 -1.532 0.785 -2.831 -0.177 2.314 -2.339 -0.243 -1.443 ML 13 11 6 16 6 2 29 98 126 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 2 28 98 126 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 24 96 123 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 3 30 100 127 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 3 30 99 127 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 90 G C - - MP 18 17 6 22 6 6 32 98 126 -9.849 -9.788 -0.013 -8.565 -8.844 -9.239 -4.308 -2.946 -4.152 0.854 -5.162 -4.683 0.609 -4.799 -4.503 3.347 -4.764 -0.119 -0.562 -2.676 -2.297 -3.115 ML 19 17 6 22 6 2 28 97 124 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 2 26 96 124 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 24 94 122 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 3 29 98 125 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 3 29 97 125 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 89 C G - - MP 24 23 6 28 4 5 30 96 124 -8.413 -1.478 -0.665 -7.034 -3.779 -3.665 -3.854 0.673 -3.082 -4.689 3.059 -0.802 -3.799 0.550 -4.327 -0.641 0.951 -4.024 -0.430 -2.680 ML 25 23 6 28 4 1 27 95 122 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 4 1 25 94 122 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 27 23 6 28 4 0 23 93 121 -4.568 -4.250 -2.265 -0.520 IL 28 28 5 28 4 2 28 96 123 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 29 29 6 29 3 3 28 95 122 -3.084 -0.211 -5.784 0.000 0.000 0.000 0.000 [ MATL 6 ] 5 - A - - - ML 30 29 6 32 3 4 28 94 121 -1.470 -0.655 -8.016 1.340 -0.422 -1.694 -1.273 D 31 29 6 32 3 0 23 91 119 -6.174 -1.687 -0.566 IL 32 32 3 32 3 3 27 93 121 -3.119 -0.206 -5.819 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 33 32 3 35 3 3 27 92 120 -9.362 -0.008 -8.016 1.339 -2.272 -0.281 -1.186 D 34 32 3 35 3 0 22 90 118 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 26 93 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 36 35 3 38 3 3 26 91 119 -9.362 -0.008 -8.016 -2.911 -1.633 -3.653 1.793 D 37 35 3 38 3 0 22 89 117 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 25 92 120 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 39 38 3 41 3 3 25 90 118 -9.362 -0.008 -8.016 -3.971 -5.465 1.954 -4.706 D 40 38 3 41 3 0 21 88 116 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 24 91 119 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 42 41 3 44 3 2 24 89 117 -9.362 -0.008 -8.016 1.956 -4.925 -4.377 -4.639 D 43 41 3 44 3 0 20 87 115 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 24 90 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 45 44 3 47 3 2 23 88 116 -9.362 -0.008 -8.016 -3.955 -3.602 -4.751 1.932 D 46 44 3 47 3 0 20 86 114 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 23 89 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - G - - - ML 48 47 3 50 3 2 22 87 115 -9.362 -0.008 -8.016 -2.764 -2.503 1.839 -3.352 D 49 47 3 50 3 0 19 85 113 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 22 88 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - u - - - ML 51 50 3 53 3 1 21 86 114 -9.362 -0.671 -1.432 0.021 -0.485 -0.604 0.689 D 52 50 3 53 3 0 19 84 112 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 23 88 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - U - - - ML 54 53 3 56 3 1 23 86 113 -1.264 -0.792 -7.357 -0.507 -0.335 -1.163 1.041 D 55 53 3 56 3 0 18 81 107 -9.486 -0.950 -1.056 IL 56 56 3 56 3 1 23 86 114 -0.997 -1.040 -6.305 0.000 0.000 0.000 0.000 [ MATL 15 ] 20 - A - - - ML 57 56 3 59 3 1 22 81 108 -9.096 -0.009 -7.750 1.257 -1.238 -1.467 -0.279 D 58 56 3 59 3 0 17 79 105 -8.525 -3.282 -0.161 IL 59 59 3 59 3 1 21 82 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 21 - a - - - ML 60 59 3 62 3 1 21 80 107 -9.111 -0.009 -7.765 0.554 -0.516 -0.896 0.373 D 61 59 3 62 3 0 17 79 105 -8.463 -1.168 -0.857 IL 62 62 3 62 3 1 20 81 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 22 - g - - - ML 63 62 3 65 3 1 20 79 106 -9.237 -0.008 -7.891 0.228 -1.406 0.923 -0.848 D 64 62 3 65 3 0 16 78 104 -7.770 -1.399 -0.699 IL 65 65 3 65 3 1 20 80 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 23 - A - - - ML 66 65 3 68 3 1 19 78 105 -9.290 -0.008 -7.944 1.319 -1.586 -1.235 -0.420 D 67 65 3 68 3 0 15 77 103 -7.303 -0.546 -1.695 IL 68 68 3 68 3 1 18 79 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 24 - A - - - ML 69 68 3 71 3 1 18 77 104 -9.362 -0.008 -8.016 1.336 -1.646 -1.183 -0.482 D 70 68 3 71 3 0 14 75 102 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 17 78 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 25 - U - - - ML 72 71 3 74 3 1 17 76 103 -9.362 -0.008 -8.016 -0.004 -1.345 -1.400 1.157 D 73 71 3 74 3 0 13 74 101 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 17 77 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 26 - U - - - ML 75 74 3 77 3 1 16 75 102 -9.362 -0.028 -5.812 -0.372 -0.625 -1.206 1.101 D 76 74 3 77 3 0 12 73 100 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 16 76 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 27 - U - - - ML 78 77 3 80 3 1 15 74 101 -9.341 -0.008 -7.996 -1.210 -1.528 -1.458 1.514 D 79 77 3 80 3 0 12 73 99 -6.596 -1.043 -0.988 IL 80 80 3 80 3 1 15 75 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 28 - C - - - ML 81 80 3 83 3 1 14 73 100 -9.362 -0.008 -8.016 -0.832 1.041 -2.094 0.197 D 82 80 3 83 3 0 11 71 98 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 14 74 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 29 - U - - - ML 84 83 3 86 3 1 13 72 99 -9.362 -0.098 -3.959 -1.508 -0.857 -1.528 1.459 D 85 83 3 86 3 0 11 70 97 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 14 73 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 30 - U - - - ML 87 86 3 89 3 1 13 71 98 -9.272 -0.096 -3.991 -0.419 -1.638 -0.919 1.264 D 88 86 3 89 3 0 10 69 96 -7.480 -1.629 -0.576 IL 89 89 3 89 3 1 13 72 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 31 - c - - - ML 90 89 3 92 3 1 12 70 97 -9.217 -0.009 -7.871 -1.001 0.872 -1.146 0.284 D 91 89 3 92 3 0 9 69 95 -7.909 -1.123 -0.898 IL 92 92 3 92 3 1 12 71 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 32 - a - - - ML 93 92 3 95 3 1 11 69 96 -9.294 -0.078 -4.295 0.792 -0.288 -1.239 0.037 D 94 92 3 95 3 0 9 68 95 -7.252 -0.571 -1.643 IL 95 95 3 95 3 1 11 70 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 33 - c - - - ML 96 95 3 98 3 1 11 68 95 -9.296 -0.008 -7.950 0.222 0.657 -0.768 -0.578 D 97 95 3 98 3 0 7 67 94 -7.238 -0.577 -1.629 IL 98 98 3 98 3 1 10 69 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 34 - C - - - ML 99 98 3 101 3 1 10 67 94 -9.362 -0.008 -8.016 -3.351 1.780 -4.192 -1.278 D 100 98 3 101 3 0 5 65 92 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 9 68 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 35 - U - - - ML 102 101 3 104 3 1 9 66 93 -9.362 -0.008 -8.016 -2.092 -1.001 -2.010 1.593 D 103 101 3 104 3 0 5 64 91 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 9 67 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 36 - G - - - ML 105 104 3 107 3 1 8 65 92 -9.362 -0.008 -8.016 -3.088 -4.239 1.866 -2.439 D 106 104 3 107 3 0 4 63 90 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 8 66 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 37 - A - - - ML 108 107 3 110 3 1 7 64 91 -9.362 -0.008 -8.016 1.902 -4.133 -2.827 -3.929 D 109 107 3 110 3 0 4 62 89 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 7 65 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 38 - A - - - ML 111 110 3 113 3 1 6 63 90 -9.362 -0.008 -8.016 1.318 -1.829 -0.552 -0.880 D 112 110 3 113 3 0 4 61 88 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 6 64 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 39 - u - - - ML 114 113 3 116 3 1 5 62 89 -9.362 -0.115 -3.736 0.316 -1.074 -0.855 0.789 D 115 113 3 116 3 0 3 60 87 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 6 63 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 40 - u - - - ML 117 116 3 119 3 1 5 61 88 -9.255 -0.261 -2.608 -0.028 -0.327 -1.784 0.950 D 118 116 3 119 3 0 3 58 84 -7.625 -3.138 -0.182 IL 119 119 3 119 3 1 5 63 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 41 - a - - - ML 120 119 3 122 3 1 4 61 87 -2.229 -0.982 -1.834 0.308 0.060 -0.680 0.132 D 121 119 3 122 3 0 3 54 80 -8.841 -0.476 -1.842 IL 122 122 3 122 3 1 6 62 88 -0.998 -1.052 -5.858 0.000 0.000 0.000 0.000 [ MATL 37 ] 46 - a - - - ML 123 122 3 125 3 1 5 53 72 -8.927 -0.011 -7.581 0.806 -0.491 -0.857 -0.017 D 124 122 3 125 3 0 1 52 71 -9.049 -0.205 -2.935 IL 125 125 3 125 3 1 3 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 47 - a - - - ML 126 125 3 128 3 1 5 52 71 -9.345 -0.008 -7.999 0.944 -0.976 -1.527 0.288 D 127 125 3 128 3 0 0 50 69 -6.534 -2.047 -0.420 IL 128 128 3 128 3 1 3 54 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 48 - C - - - ML 129 128 3 131 3 1 5 51 70 -9.345 -0.008 -7.999 -1.231 1.451 -2.417 -0.614 D 130 128 3 131 3 0 0 49 68 -6.534 -2.047 -0.420 IL 131 131 3 131 3 1 2 53 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 49 - c - - - ML 132 131 3 134 3 1 4 49 69 -9.345 -0.008 -7.999 -0.389 0.641 -0.992 0.232 D 133 131 3 134 3 0 0 48 68 -6.534 -1.111 -0.926 IL 134 134 3 134 3 1 1 52 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 50 - u - - - ML 135 134 3 137 3 1 4 48 67 -9.362 -0.008 -8.016 0.485 -1.217 -0.381 0.487 D 136 134 3 137 3 0 0 47 67 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 51 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 51 - U - - - ML 138 137 3 140 3 1 3 47 66 -9.362 -0.008 -8.016 -2.108 -1.874 -3.259 1.762 D 139 137 3 140 3 0 0 46 65 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 52 - G - - - ML 141 140 3 143 3 1 3 46 65 -9.362 -0.008 -8.016 -3.971 -5.465 1.954 -4.706 D 142 140 3 143 3 0 0 45 64 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 53 - A - - - ML 144 143 3 146 3 1 2 45 64 -9.362 -0.008 -8.016 1.477 -2.277 -2.419 -0.280 D 145 143 3 146 3 0 0 44 63 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 54 - a - - - ML 147 146 3 149 3 1 2 44 63 -9.362 -0.008 -8.016 0.934 -1.682 -0.155 -0.186 D 148 146 3 149 3 0 0 43 62 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 55 - G - - - ML 150 149 3 152 3 1 2 43 62 -9.362 -0.008 -8.016 -1.807 -2.499 1.729 -2.165 D 151 149 3 152 3 0 0 42 61 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 56 - u - - - ML 153 152 3 155 3 1 1 42 61 -1.683 -0.906 -2.691 0.402 -0.600 -1.345 0.701 D 154 152 3 155 3 0 0 40 59 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 42 61 -2.589 -0.295 -5.742 0.000 0.000 0.000 0.000 [ MATL 48 ] 59 - u - - - ML 156 155 3 158 3 1 1 41 60 -9.126 -0.104 -3.890 -0.468 -0.994 -0.042 0.851 D 157 155 3 158 3 0 0 38 57 -8.400 -3.913 -0.104 IL 158 158 3 158 3 1 1 43 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 60 - c - - - ML 159 158 3 161 3 1 1 40 59 -9.032 -0.027 -5.926 -0.206 0.692 -1.426 0.196 D 160 158 3 161 3 0 0 38 57 -8.754 -2.123 -0.381 IL 161 161 3 161 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 61 - A - - - ML 162 161 3 164 3 1 1 39 57 -9.093 -0.009 -7.747 1.501 -1.793 -1.508 -0.918 D 163 161 3 164 3 0 0 37 56 -8.536 -1.751 -0.514 IL 164 164 3 164 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 62 - A - - - ML 165 164 3 167 3 1 1 38 56 -9.177 -0.009 -7.831 1.466 -1.064 -1.831 -1.067 D 166 164 3 167 3 0 0 35 54 -8.146 -3.659 -0.124 IL 167 167 3 167 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 63 - A - - - ML 168 167 3 170 3 1 1 36 55 -9.177 -0.303 -2.415 1.658 -2.040 -2.516 -1.229 D 169 167 3 170 3 0 0 34 53 -8.146 -3.659 -0.124 IL 170 170 3 170 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 64 - a - - - ML 171 170 3 173 3 1 1 36 54 -0.870 -1.261 -4.805 0.806 -0.574 -1.420 0.270 D 172 170 3 173 3 0 0 33 51 -9.147 -1.463 -0.654 IL 173 173 3 173 3 1 1 35 54 -1.921 -0.559 -4.126 0.000 0.000 0.000 0.000 [ MATL 54 ] 68 - a - - - ML 174 173 3 176 3 1 1 33 52 -8.988 -0.010 -7.642 0.393 0.007 -0.712 0.100 D 175 173 3 176 3 0 0 32 51 -8.887 -0.962 -1.045 IL 176 176 3 176 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 69 - u - - - ML 177 176 3 179 3 1 1 32 51 -9.205 -0.009 -7.859 0.453 -0.382 -1.338 0.554 D 178 176 3 179 3 0 0 30 49 -7.983 -3.496 -0.140 IL 179 179 3 179 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 70 - C - - - ML 180 179 3 182 3 1 1 31 50 -9.205 -0.009 -7.859 -1.251 1.006 -2.487 0.479 D 181 179 3 182 3 0 0 30 49 -7.983 -0.610 -1.553 IL 182 182 3 182 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 71 - G - - - ML 183 182 3 185 3 1 1 30 49 -9.331 -0.008 -7.985 -2.368 -1.690 1.750 -2.901 D 184 182 3 185 3 0 0 29 48 -6.776 -2.289 -0.347 IL 185 185 3 185 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 72 - A - - - ML 186 185 3 188 3 1 1 29 48 -9.331 -0.008 -7.985 1.884 -2.957 -3.487 -3.438 D 187 185 3 188 3 0 0 28 47 -6.776 -2.289 -0.347 IL 188 188 3 188 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 73 - G - - - ML 189 188 3 191 3 1 1 28 47 -9.331 -0.033 -5.589 -2.172 -2.658 1.807 -3.061 D 190 188 3 191 3 0 0 27 46 -6.776 -0.874 -1.168 IL 191 191 3 191 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 74 - C - - - ML 192 191 3 194 3 1 1 27 45 -9.338 -0.008 -7.992 -2.648 1.868 -4.247 -2.849 D 193 191 3 194 3 0 0 26 45 -6.661 -2.174 -0.380 IL 194 194 3 194 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 75 - U - - - ML 195 194 3 197 3 1 1 26 44 -9.338 -0.008 -7.992 -1.423 -1.787 -2.998 1.684 D 196 194 3 197 3 0 0 25 44 -6.661 -2.174 -0.380 IL 197 197 3 197 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 76 - U - - - ML 198 197 3 200 3 1 1 25 43 -9.338 -0.008 -7.992 -3.918 -3.569 -4.714 1.930 D 199 197 3 200 3 0 0 24 42 -6.661 -2.174 -0.380 IL 200 200 3 200 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 77 - U - - - ML 201 200 3 203 3 1 1 23 42 -9.338 -0.008 -7.992 -2.489 -2.169 -2.430 1.771 D 202 200 3 203 3 0 0 23 41 -6.661 -2.174 -0.380 IL 203 203 3 203 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 78 - U - - - ML 204 203 3 206 3 1 1 22 41 -9.338 -0.008 -7.992 -2.428 -2.410 -1.769 1.737 D 205 203 3 206 3 0 0 22 40 -6.661 -0.977 -1.052 IL 206 206 3 206 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 79 - U - - - ML 207 206 3 209 3 1 1 21 40 -9.362 -0.008 -8.016 -2.911 -1.635 -3.653 1.793 D 208 206 3 209 3 0 0 21 40 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 25 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 80 - A - - - ML 210 209 3 212 3 1 1 20 39 -9.362 -0.008 -8.016 1.883 -3.983 -2.514 -3.781 D 211 209 3 212 3 0 0 20 38 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 24 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 81 - A - - - ML 213 212 3 215 3 1 1 19 37 -9.362 -0.165 -3.230 1.534 -1.919 -2.409 -0.616 D 214 212 3 215 3 0 0 19 37 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 82 - C - - - ML 216 215 3 218 3 1 1 18 36 -9.205 -0.009 -7.859 0.001 1.104 -1.554 -0.976 D 217 215 3 218 3 0 0 17 35 -7.983 -3.496 -0.140 IL 218 218 3 218 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 83 - a - - - ML 219 218 3 221 3 1 1 17 35 -9.205 -0.009 -7.859 0.734 0.510 -1.624 -0.764 D 220 218 3 221 3 0 0 16 34 -7.983 -0.316 -2.374 IL 221 221 3 221 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 84 - C - - - ML 222 221 3 224 3 1 1 15 34 -9.362 -0.008 -8.016 -3.674 1.884 -3.257 -2.997 D 223 221 3 224 3 0 0 16 34 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 85 - U - - - ML 225 224 3 227 3 1 1 14 32 -9.362 -0.008 -8.016 -3.955 -3.602 -4.751 1.932 D 226 224 3 227 3 0 0 15 33 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 86 - G - - - ML 228 227 3 230 3 1 1 12 31 -9.362 -0.008 -8.016 -3.971 -5.465 1.954 -4.706 D 229 227 3 230 3 0 0 13 32 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 87 - A - - - ML 231 230 3 233 2 1 1 1 1 * 0.000 1.956 -4.925 -4.377 -4.639 D 232 230 3 233 2 0 0 0 0 * 0.000 IL 233 233 3 233 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 74 ] - - - - - - E 234 233 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD36 ACC RF00049 DESC Small nucleolar RNA SNORD36 LENG 77 MAXL 148 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:12:43 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 59 EFFN 9.942566 CKSUM 1391374280 STATS LOCAL MSV -8.6193 0.71863 STATS LOCAL VITERBI -9.6978 0.71863 STATS LOCAL FORWARD -3.4119 0.71863 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.21833 1.66010 1.58468 1.17395 1.38629 1.38629 1.38629 1.38629 0.05078 4.99039 3.15329 1.46634 0.26236 0.00000 * 1 1.80903 1.58220 1.45905 0.92079 1 u - - < 1.38629 1.38629 1.38629 1.38629 0.01421 4.95382 4.95382 1.46634 0.26236 0.27654 1.42049 2 1.56008 1.65804 1.66912 0.88927 2 u - - < 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 3 2.11114 2.28842 0.34225 2.69850 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 4 2.22294 0.51787 2.03253 1.80232 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 5 0.42977 1.66915 2.65715 2.39926 5 A - - _ 1.38629 1.38629 1.38629 1.38629 0.49311 0.96109 4.99039 0.03520 3.36421 1.09861 0.40547 6 0.43125 3.13989 1.57642 2.29958 7 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 7 3.58743 2.56151 4.09953 0.12947 8 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 8 4.34476 5.40974 0.02558 4.85271 9 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 9 0.02405 5.05097 4.66134 4.84042 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 10 4.38008 4.11391 4.93728 0.03671 11 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 11 3.51244 3.14071 0.09749 3.92141 12 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 12 1.38256 1.73531 1.81094 0.89350 13 u - - _ 1.38629 1.38629 1.38629 1.38629 0.50563 4.99039 0.94142 1.46634 0.26236 1.09861 0.40547 13 1.78384 1.62519 2.23132 0.63914 14 U - - _ 1.38629 1.38629 1.38629 1.38629 0.62824 0.78649 4.50706 0.78905 0.60564 0.63406 0.75595 14 0.48348 2.31011 2.48739 1.60451 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01665 4.79687 4.79687 1.46634 0.26236 2.50884 0.08486 15 0.98777 1.75928 2.03743 1.12375 21 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01646 4.80794 4.80794 1.46634 0.26236 0.76855 0.62303 16 1.23178 2.42594 0.71126 2.04943 22 g - - _ 1.38629 1.38629 1.38629 1.38629 0.01501 4.89960 4.89960 1.46634 0.26236 0.92137 0.50745 17 0.44334 2.58042 2.29548 1.70563 23 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01444 4.93812 4.93812 1.46634 0.26236 0.21163 1.65688 18 0.43250 2.62461 2.25280 1.75133 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 19 1.39261 2.40397 2.41528 0.55884 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 20 1.66974 1.84100 2.25705 0.60077 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02858 4.99039 3.84550 1.46634 0.26236 1.09861 0.40547 21 2.31078 2.53676 2.43122 0.30957 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01390 4.97571 4.97571 1.46634 0.26236 0.49257 0.94431 22 2.01981 0.63239 2.95169 1.25968 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 23 2.56595 2.01168 2.48603 0.34793 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.07989 4.99039 2.65951 1.46634 0.26236 1.09861 0.40547 24 1.71210 2.65198 2.04242 0.47919 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.07917 4.92512 2.67569 1.46634 0.26236 1.10131 0.40412 25 2.18214 0.74425 2.20910 1.19631 31 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01523 4.88514 4.88514 1.46634 0.26236 0.71156 0.67507 26 0.81727 1.58407 2.30154 1.37389 32 a - - _ 1.38629 1.38629 1.38629 1.38629 0.06551 4.94157 2.87767 1.46634 0.26236 0.22305 1.60980 27 1.23411 0.89337 1.93521 1.86279 33 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01438 4.94248 4.94248 1.46634 0.26236 0.22627 1.59702 28 3.92898 0.13791 4.49284 2.32308 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 29 3.02913 2.11208 2.83955 0.25851 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 30 3.73363 4.54504 0.08269 3.10469 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 31 0.05878 4.45581 3.43492 4.32415 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 32 0.44500 2.76726 1.77789 2.06083 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 33 1.16122 2.18950 2.00223 0.82123 39 u - - _ 1.38629 1.38629 1.38629 1.38629 0.09213 4.99039 2.51070 1.46634 0.26236 1.09861 0.40547 34 1.41282 1.61957 2.73618 0.70574 40 u - - _ 1.38629 1.38629 1.38629 1.38629 0.20135 4.91306 1.74285 1.46634 0.26236 2.63459 0.07445 35 1.16984 1.32661 1.87203 1.30787 41 a - - _ 1.38629 1.38629 1.38629 1.38629 0.76166 1.45852 1.20221 0.83848 0.56628 0.27773 1.41677 36 0.80682 1.73462 2.00944 1.41390 46 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01886 4.67329 4.67329 1.46634 0.26236 0.09235 2.42798 37 0.70663 2.10964 2.53319 1.18414 47 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01387 4.97815 4.97815 1.46634 0.26236 1.56619 0.23425 38 2.29778 0.35417 3.15762 1.86281 48 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01387 4.97815 4.97815 1.46634 0.26236 1.56619 0.23425 39 1.69217 0.91122 2.09762 1.23409 49 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01387 4.97815 4.97815 1.46634 0.26236 0.54073 0.87304 40 1.03992 2.30207 1.65030 1.03712 50 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 41 2.94404 2.76076 3.80763 0.14861 51 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 42 4.34476 5.40974 0.02558 4.85271 52 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 43 0.33717 3.14980 3.26203 1.58456 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 44 0.71454 2.67418 1.48551 1.53604 54 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 45 2.72340 3.16142 0.17487 2.94850 55 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 46 1.09698 1.82436 2.38196 0.88569 56 u - - _ 1.38629 1.38629 1.38629 1.38629 0.68392 1.10633 1.80426 0.10633 2.29393 1.09861 0.40547 47 1.76163 2.12774 1.39394 0.77429 59 u - - _ 1.38629 1.38629 1.38629 1.38629 0.08606 4.81866 2.59857 1.46634 0.26236 3.26555 0.03892 48 1.55248 0.87043 2.44390 1.26342 60 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03000 4.75005 3.86770 1.46634 0.26236 1.49704 0.25333 49 0.31658 2.73387 2.50832 2.07949 61 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01668 4.79474 4.79474 1.46634 0.26236 1.21077 0.35378 50 0.34010 2.15229 2.76944 2.21290 62 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01568 4.85632 4.85632 1.46634 0.26236 3.06541 0.04776 51 0.21504 2.89474 3.30398 2.28825 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.23341 4.85632 1.60749 1.46634 0.26236 3.06541 0.04776 52 0.80136 1.80398 2.45671 1.20090 64 a - - _ 1.38629 1.38629 1.38629 1.38629 0.88723 0.60473 3.17046 0.30457 1.33727 0.99978 0.45881 53 1.10700 1.36535 1.89688 1.33135 68 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01733 4.75732 4.75732 1.46634 0.26236 0.75491 0.63498 54 1.05963 1.65955 2.38003 0.99252 69 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01536 4.87679 4.87679 1.46634 0.26236 2.93305 0.05470 55 2.35275 0.65726 3.28172 1.05252 70 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01536 4.87679 4.87679 1.46634 0.26236 0.32896 1.27180 56 3.23185 2.55149 0.15610 3.60908 71 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01401 4.96792 4.96792 1.46634 0.26236 1.83512 0.17387 57 0.06978 3.50752 3.99965 3.95759 72 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01401 4.96792 4.96792 1.46634 0.26236 1.83512 0.17387 58 3.00693 3.26291 0.12024 3.66637 73 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03203 4.96792 3.70652 1.46634 0.26236 0.38447 1.14197 59 3.29081 0.07892 4.50561 3.58927 74 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01394 4.97302 4.97302 1.46634 0.26236 1.71025 0.19945 60 2.42854 2.71670 3.64584 0.19889 75 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01394 4.97302 4.97302 1.46634 0.26236 1.71025 0.19945 61 4.35417 4.09012 4.91075 0.03766 76 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01394 4.97302 4.97302 1.46634 0.26236 1.71025 0.19945 62 3.27939 3.00236 3.12460 0.14073 77 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01394 4.97302 4.97302 1.46634 0.26236 1.71025 0.19945 63 3.26251 3.22427 2.62521 0.16311 78 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01394 4.97302 4.97302 1.46634 0.26236 0.44885 1.01710 64 3.58778 2.56285 4.09986 0.12933 79 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 65 0.07090 4.34832 3.19817 4.22114 80 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 66 0.29830 2.82685 3.23676 1.83616 81 A - - _ 1.38629 1.38629 1.38629 1.38629 0.12896 4.99039 2.16991 1.46634 0.26236 1.09861 0.40547 67 1.39438 0.57752 2.53546 2.19376 82 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01536 4.87679 4.87679 1.46634 0.26236 2.93305 0.05470 68 0.85655 0.99795 2.61316 2.01412 83 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01536 4.87679 4.87679 1.46634 0.26236 0.11257 2.23991 69 4.14282 0.06838 3.67710 3.69224 84 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 70 4.38008 4.11391 4.93728 0.03671 85 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 71 4.34476 5.40974 0.02558 4.85271 86 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 72 0.02405 5.05097 4.66134 4.84042 87 A - - _ 1.38629 1.38629 1.38629 1.38629 0.47153 0.99655 4.99039 0.03646 3.32975 1.09861 0.40547 73 2.08083 2.36092 0.51484 1.69694 89 G - - > 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 74 3.05034 0.40293 2.18343 1.76235 90 C - - > 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 75 0.94831 1.90998 1.46487 1.45494 91 a - - > 1.38629 1.38629 1.38629 1.38629 0.01370 4.99039 4.99039 1.46634 0.26236 1.09861 0.40547 76 1.13625 1.74927 1.36051 1.39213 92 a - - > 1.38629 1.38629 1.38629 1.38629 0.06854 4.99039 2.82281 1.46634 0.26236 1.09861 0.40547 77 1.03233 1.98926 1.84093 1.05452 93 a - - : 1.38629 1.38629 1.38629 1.38629 0.00726 4.92911 * 1.46634 0.26236 0.00000 * //